Course - Heidelberg, Germany
This course was developed with biologists as intended audience in mind. Basic knowledge of massively parallel sequencing (MPS) is desirable. The course participants will use BioConductor software and Illumina BaseSpace Cloud apps. On the other side, R-coding skills and deep knowledge of statistics are not necessary for attendance because most analyses will be performed with OneChannelGUI (a graphical interface to a series of BioConductor tools, which enables handling microarray data analysis as well as RNA-seq data without requiring programming skills). Computers for hands-on exercises will be provided along with demo data sets. Upon request, participants could bring along their own data to analyse.
Topics
- Tools for RNA-seq data analysis
- Experimental design
- Quality control
- Normalization and data reformatting
- Basic Statistics
- Selecting differentially regulated genes/microRNAs
- Selecting alternative splicing events
- Multiple testing
- Biological interpretation
- Organization: CCO EMBL
Tue, Jun 23, 2015 - Thu, Jun 25, 2015
Advanced Training Centre
European Molecular Biology Laboratory (EMBL), Meyerhofstrasse 1,
Heidelberg, Germany
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